Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884037.1_cds_XP_016438694.1_34334
CDS Infomation

[gene=LOC107764608] [db_xref=GeneID:107764608] [protein=SPX domain-containing membrane protein At4g22990-like] [protein_id=XP_016438694.1] [location=complement(join(301..506,1448..1749,2877..3331,3459..3563,3763..4074,4693..4813,5180..5232))] [gbkey=CDS]
Sequence

ATGGTTGCTTTTGGGAAAAAGTTGAAGGATAGACAAATCCAAGAATGGCTAGGATACTAT
ATCAATTACAAATTAATGAAGAAGAAGGTTAAGCAGTATGCTAACCAAAGCCAAGCCGTA
ACATTGGATCGGCGATATGTTCTCAAGGATTTCTCCAGAATGTTGGACAACCAGATTGAA
ACAATAGTTCTCTTTTTGTTGGAACAACAAGGAGTTCTTGCGAGCAGGATATCTGAACTT
AATGAAAAGAAAGATTCTCTTCAAGAACAGCCTGATATATCCAAAATAAATGAGCTACGA
GAAGCTTATCGAGCTGTGGGACGTGATCTTCTAAAGCTTCTCTATTTCGTTGAAATAAAT
GCTATTGGATTACGGAAGATACTTAAAAAGTTCGACAAACGTTTTGGCTATAAGTTCACC
GATTACTATGTCAAAACCCGAGCTAATCATCCATATTCCCAACTTCAGCAAGTTTTCAAG
CATGTGGGATTAGGGGCAGTTGTTGGAGCAATATCTCGTAATCTCGCCGATCTGCAAGAC
CGTCAGGGAAGCTACTTGTCAATTTATGACCAGCCAGCTCTTCCTCTCCAGGACCCTGTA
GTGGACTCAATGCAAGCAGCTGTTGATAGATTGAGTCATTCAACAAACTTCCTTAACTTT
TTGGCTCAGCATGCACTTATCATGCAAGAAGAATTACCCTCTCCTGTTGAGGAAGAAGTT
GATGATCAGAAATATCATTTTATGTCGCTGCTGTTAAACTTGGCAAATACTTTCCTTTAC
ATGGTTAATACATATATTATTGTGCCAACAGCAGATGATTATTCTATGAGCTTAGGTGCT
GCTGCAACAGTTTGTGGGATTGTGATTGGAGCCATGGCTGTCGCACAGATCTTTTCGTCT
GTGTATTTCAGTGCTTGGTCAAACAGGTCTTATTTCAGACCACTGGTATTTAGCAGTATA
ATTCTTTTTATTGGGAATACCATGTATGCATTGGCTTATGATCTCAAATCAATACCGGTT
CTGCTTATCGGTCGTTTATGTTGCGGATTTGGTTCCGCCAGAGCAGTGAACCGTCGCTAC
ATCAGTGATTGTGTGCCACTTAGACTTCGGATGCAGGCTTCAGCAGGTTTTGTTAGTGCT
AGCGCACTTGGAATGGCATGTGGCCCTGCACTTGCTGGTTTACTTCAGACAAATTTTAAG
ATTTACAAGTTGACCTTCAATCAAGATACTTTGCCCGGTTGGCTTATGGCTTTTGCATGG
TTAATTTATTTGGTATGGCTGTGGATCTCATTTAAAGAACCCGCTCGCGAGGCTGAAGTA
AACAATGTTCCTCAAGAATCTAATGCTGATGCCCTTGAAAAGGGTGTTGTGGAACCATTG
CTATTAAAATCACCAGAGAATCAACAAGATGAGGATGAAGAAGATGGTGACGAGAGTGAA
GAAGCTTCCAAGGAGTCTCATCAACCTGTTAATTCCATAGCAGCAGCATACAGATTACTC
ACTCCTTCTGTGAAGGTATGTTCAACTCTAAGCTCCTTGCTTCTTTTTGTTTGA

Peptide Sequence

PEP ID

XP_016438694.1
PEP Infomation

PREDICTED: SPX domain-containing membrane protein At4g22990-like [Nicotiana tabacum]
Sequence

MVAFGKKLKDRQIQEWLGYYINYKLMKKKVKQYANQSQAVTLDRRYVLKDFSRMLDNQIE
TIVLFLLEQQGVLASRISELNEKKDSLQEQPDISKINELREAYRAVGRDLLKLLYFVEIN
AIGLRKILKKFDKRFGYKFTDYYVKTRANHPYSQLQQVFKHVGLGAVVGAISRNLADLQD
RQGSYLSIYDQPALPLQDPVVDSMQAAVDRLSHSTNFLNFLAQHALIMQEELPSPVEEEV
DDQKYHFMSLLLNLANTFLYMVNTYIIVPTADDYSMSLGAAATVCGIVIGAMAVAQIFSS
VYFSAWSNRSYFRPLVFSSIILFIGNTMYALAYDLKSIPVLLIGRLCCGFGSARAVNRRY
ISDCVPLRLRMQASAGFVSASALGMACGPALAGLLQTNFKIYKLTFNQDTLPGWLMAFAW
LIYLVWLWISFKEPAREAEVNNVPQESNADALEKGVVEPLLLKSPENQQDEDEEDGDESE
EASKESHQPVNSIAAAYRLLTPSVKVCSTLSSLLLFV

Transcript Sequence

Gene sequence data has not been registered.